If you’ve been searching for a delightful twist on classic bagels that’s nutritious and incredibly satisfying, this Greek Yogurt Protein Bagels Recipe is an absolute game-changer. These bagels come out soft yet chewy, boasting a slight tang from the Greek yogurt that perfectly complements their light, fluffy texture. With simple ingredients and a quick method, they’re perfect for breakfast, snacks, or anytime you want a wholesome treat packed with protein. Trust me, once you try these, you’ll keep this recipe on hand for mornings when you want something comforting yet nourishing.

Ingredients You’ll Need
One of the best things about this Greek Yogurt Protein Bagels Recipe is how few and straightforward the ingredients are. Each one plays a vital role in giving these bagels their wonderful taste, texture, and beautiful golden color.
- 2 cups all-purpose flour: The foundation of your bagels, providing structure and chewiness.
- 1 ¾ cups Greek yogurt (full-fat recommended): Adds protein, moisture, and a subtle tang that makes these bagels special.
- 4 teaspoons baking powder: The leavening agent that gives the bagels their airy lift without yeast.
- 1 ½ teaspoons sugar: Just enough sweetness to balance the yogurt’s tang.
- ¾ teaspoon sea salt: Enhances all the flavors and balances the sweetness.
- 1 egg: Used for the egg wash to achieve a shiny, golden crust.
- Optional toppings (everything bagel seasoning, poppy seeds, sesame seeds, flaky sea salt): Add extra texture and flavor to personalize your bagels.
How to Make Greek Yogurt Protein Bagels Recipe
Step 1: Preheat and Mix Dry Ingredients
Start by heating your oven to 375°F. While it warms up, whisk together the flour, baking powder, sugar, and sea salt in a mixing bowl. This simple blend is crucial as it evenly distributes the leavening and seasonings so every bite has perfect balance.
Step 2: Incorporate the Greek Yogurt
Add in the Greek yogurt and mix until the dough comes together. It will look a little crumbly or clumpy at first, but don’t worry! Use your hands to pull it all into a single ball. If the dough feels too dry, add a teaspoon of water or a small spoonful more yogurt to help it bind. The moisture and protein in the yogurt are what make these bagels uniquely tender yet substantial.
Step 3: Knead and Divide
Transfer the dough to a lightly floured surface and knead gently about 10 to 15 times. This gives the dough some elasticity and helps develop the lovely chewy texture. Then, split it into six equal portions — you can cut with a knife or simply tear it apart by hand.
Step 4: Shape the Bagels
Roll each piece into a thin rope about 1 inch thick or a little less. Loop the rope around and press the ends together firmly to form classic bagel rings. Place each shaped bagel on a parchment-lined baking sheet, spacing them evenly to bake evenly and rise beautifully.
Step 5: Egg Wash and Toppings
Whisk the egg in a small bowl to create your egg wash. Brush this generously over every exposed surface of each bagel — don’t forget the holes! This step is what gives your bagels a gorgeous shiny finish and helps any toppings stick perfectly. Sprinkle on your favorite seeds or seasoning blends if you want to jazz them up.
Step 6: Bake to Golden Perfection
Pop the tray in the oven and bake for about 19 to 23 minutes until the bagels are golden brown and smell irresistible. Be careful not to overbake; you want soft, tender centers with a slightly crisp crust. Once done, let them cool slightly, though eating them warm is absolutely heavenly.
How to Serve Greek Yogurt Protein Bagels Recipe

Garnishes
These bagels are naturally delicious on their own, but topping them with cream cheese, mashed avocado, or a smear of nut butter takes the experience to a new level. Fresh herbs, smoked salmon, or a drizzle of honey can also complement their subtle tang and hearty texture beautifully.
Side Dishes
Pair your protein-packed bagels with fresh fruits like berries or sliced tomatoes for a refreshing contrast. A simple green salad or a small bowl of warm soup can transform these bagels into a well-rounded meal any time of day.
Creative Ways to Present
Try turning your bagels into sandwiches filled with grilled veggies and hummus, or even a breakfast bagel with eggs and spinach. Because the base recipe is clean and mild, it opens up so many fun flavor combinations to explore. Use mini bagels for party platters or slice and toast for delightful open-faced bites.
Make Ahead and Storage
Storing Leftovers
If you have leftovers, store your bagels in an airtight container at room temperature for up to two days to maintain freshness. Wrapping them in a clean kitchen towel before tucking them in a container can help keep the crust from getting too soft.
Freezing
These bagels freeze beautifully. Place completely cooled bagels in a freezer bag with air squeezed out and freeze for up to 3 months. You can thaw them overnight in the fridge or gently defrost at room temperature before reheating.
Reheating
To bring back that freshly baked glory, slice your bagel and toast it, or warm it directly in the oven at 350°F for about 5-7 minutes. A quick zap in the microwave with a moist towel can also revive softness, though it won’t keep the crust as crisp.
FAQs
Can I use non-fat Greek yogurt instead of full-fat?
Absolutely! While full-fat Greek yogurt gives a richer flavor and better texture, non-fat will work just fine if you prefer a lighter option. Just be mindful it might affect the bagel’s moistness slightly.
Is it possible to make these gluten-free?
Because this recipe relies on the gluten in all-purpose flour for structure, substitutions can be tricky. You might experiment with a gluten-free flour blend that includes xanthan gum, but results may vary from the traditional chewy bagel texture.
Do I need yeast to make these bagels?
No yeast needed here! The baking powder acts as a leavening agent making this a quicker, fuss-free bagel recipe while still giving you that lovely lift and chew.
Can I add other flavors to the dough?
Definitely! Cinnamon and raisins, garlic and herb, or sun-dried tomatoes and olives would all be fantastic additions. Just fold them in after mixing the yogurt with the dry ingredients before kneading.
How do I prevent the bagels from drying out?
Avoid overbaking to keep the interior soft and moist. Also, storing the bagels properly in an airtight container or freezing leftovers promptly will help maintain their freshness longer.
Final Thoughts
I hope you’re as excited as I am for you to try the Greek Yogurt Protein Bagels Recipe. They’re such a wonderful, easy way to bring a homemade touch to a classic favorite with an extra boost of protein and flavor. Whether you’re new to bagel making or a seasoned pro looking for something new, this recipe is sure to become a beloved staple in your kitchen.
Print
Greek Yogurt Protein Bagels Recipe
- Prep Time: 10 minutes
- Cook Time: 20 minutes
- Total Time: 40 minutes
- Yield: 6 bagels
- Category: Breakfast
- Method: Baking
- Cuisine: Greek
- Diet: Low Fat
Description
These Greek Yogurt Protein Bagels are a quick and easy homemade bagel recipe that combines the tanginess of full-fat Greek yogurt with all-purpose flour, resulting in soft yet slightly dense bagels packed with protein. Ready in just 40 minutes, they make a wholesome breakfast or snack option topped with your choice of seeds or seasoning.
Ingredients
Bagel Dough
- 2 cups all-purpose flour
- 1 ¾ cups full-fat Greek yogurt
- 4 teaspoons baking powder
- 1 ½ teaspoons sugar
- ¾ teaspoon sea salt
Egg Wash and Toppings
- 1 egg, whisked (for egg wash)
- Optional toppings: everything bagel seasoning, poppy seeds, sesame seeds, flakey sea salt
Instructions
- Preheat Oven: Preheat your oven to 375°F (190°C) to ensure it’s hot enough for baking the bagels.
- Mix Dry Ingredients: In a large bowl, combine the all-purpose flour, baking powder, sugar, and sea salt. Use a whisk or fork to mix all the dry ingredients evenly.
- Add Greek Yogurt: Add the full-fat Greek yogurt to the dry mixture and stir well to combine. The dough will be crumbly or clumpy initially. Gather the mixture into a single ball.
- Knead Dough: Transfer the dough ball to a lightly floured surface. Knead gently about 10 to 15 times to create a more uniform dough. If the mixture seems too dry, add a teaspoon of water or a little extra yogurt.
- Shape Bagels: Divide the dough into 6 equal pieces. Roll each piece into a rope about 1 inch in diameter, then form a circle by joining the ends, pressing them firmly together. Place each bagel onto a baking sheet lined with parchment paper.
- Apply Egg Wash and Add Toppings: Whisk the egg in a small bowl and brush the egg wash evenly over each bagel, making sure to cover all exposed surfaces, including the center holes. Sprinkle any desired optional toppings such as everything bagel seasoning, poppy seeds, sesame seeds, or flaky sea salt.
- Bake Bagels: Bake in the preheated oven for 19 to 23 minutes until the bagels turn golden brown. Avoid overbaking for the best texture.
- Cool and Serve: Remove the bagels from the oven and allow them to cool slightly before serving. Enjoy warm or at room temperature.
Notes
- If dough feels too dry, adding a teaspoon of water or a bit more Greek yogurt helps achieve the right consistency.
- Ensure the ends of each bagel rope are pressed well to prevent them from opening during baking.
- Don’t overbake; bagels should be golden but still soft inside.
- Use parchment paper to prevent sticking and facilitate easy transfer off the baking sheet.
- These bagels are best eaten fresh but can be stored in an airtight container for 1-2 days or frozen for longer storage.

